Stem-loop prd-mir-60

Accession

MI0025615

Description

Panagrellus redivivus prd-mir-60 precursor miRNA

Sequence

UGGCUAGCAAUGCGCAUAACAUCucgaaccguuuucaaugaUAUUAUGCUCAAUUACUAGCUAUU
(((((((.((((.((((((.(((..(((.....)))...))).)))))).).))).)))))))..

Structure

--       C   - C      C   -uc   c 
  UGGCUAG AAU G GCAUAA AUC   gaa c
  ||||||| ||| | |||||| |||   ||| g
  AUCGAUC UUA C CGUAUU Uag   cuu u
UU       A   A U      A   uaa   u 

Annotation confidence Not enough data

Genome context

KB455424.1: 39965-40029 [-]

Mature prd-miR-60-5p

• Accession: MIMAT0030588
• Description: Panagrellus redivivus prd-miR-60-5p mature miRNA
• Sequence: 1 - UGGCUAGCAAUGCGCAUAACAUC - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-60-3p

• Accession: MIMAT0030589
• Description: Panagrellus redivivus prd-miR-60-3p mature miRNA
• Sequence: 42 - UAUUAUGCUCAAUUACUAGCUAUU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295