Stem-loop prd-mir-7899

Accession

MI0025618

Description

Panagrellus redivivus prd-mir-7899 precursor miRNA

Sequence

AGUACAACUAUCGUCUAUGAACagucgaaaccuucuugUUCAUUGCGAUUGGUUGGACUAG
(((.((((((((((..((((((((..(((...))))))))))).)))).)))))).)))..

Structure

--   A      -    CU        uc   a 
  AGU CAACUA UCGU  AUGAACag  gaa  
  ||| |||||| ||||  ||||||||  ||| c
  UCA GUUGGU AGCG  UACUUguu  cuu  
GA   G      U    -U        --   c 

Annotation confidence Not enough data

Genome context

KB455326.1: 264830-264890 [-]

Mature prd-miR-7899-5p

• Accession: MIMAT0030594
• Description: Panagrellus redivivus prd-miR-7899-5p mature miRNA
• Sequence: 1 - AGUACAACUAUCGUCUAUGAAC - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7899-3p

• Accession: MIMAT0030595
• Description: Panagrellus redivivus prd-miR-7899-3p mature miRNA
• Sequence: 39 - UUCAUUGCGAUUGGUUGGACUAG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295