Stem-loop prd-mir-7927d

Accession

MI0025627

Description

Panagrellus redivivus prd-mir-7927d precursor miRNA

Gene family

MIPF0001660; mir-7927

Sequence

CGGGGCGUUUCUUUGACUGAUGuuguuacguuuaUCAGUCAUUGAAGUGCUUCUGU
.((((((((((..(((((((((..........)))))))))..))))))))))...

Structure

--C          UU         uugu 
   GGGGCGUUUC  UGACUGAUG    u
   ||||||||||  |||||||||     
   CUUCGUGAAG  ACUGACUau    a
UGU          UU         uugc 

Annotation confidence Not enough data

Genome context

KB455445.1: 33844-33899 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7927d

Mature prd-miR-7927d-5p

• Accession: MIMAT0030612
• Description: Panagrellus redivivus prd-miR-7927d-5p mature miRNA
• Sequence: 1 - CGGGGCGUUUCUUUGACUGAUG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7927d-3p

• Accession: MIMAT0030613
• Description: Panagrellus redivivus prd-miR-7927d-3p mature miRNA
• Sequence: 35 - UCAGUCAUUGAAGUGCUUCUGU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295