miRBase entry: prd-mir-993

Stem-loop prd-mir-993


Accession
MI0025629
Description
Panagrellus redivivus prd-mir-993 precursor miRNA


Sequence

ACCUGUAGCCGCUCGCUUAUacuauuuugagguuaUAAGCUCGCUUCUACAGGAUU
.(((((((..((..(((((((((.......)).)))))))..))..)))))))...

Structure
--A       CC  UC       -  au 
   CCUGUAG  GC  GCUUAUa cu  u
   |||||||  ||  ||||||| ||  u
   GGACAUC  CG  CGAAUau gg  u
UUA       UU  CU       u  ag 


Annotation confidence Not enough data
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Genome context
KB455460.1: 1058503-1058558 [-]

Database links

Mature prd-miR-993-5p

Accession MIMAT0030616
Description Panagrellus redivivus prd-miR-993-5p mature miRNA
Sequence 1 - ACCUGUAGCCGCUCGCUUAU - 20
Evidence experimental
Illumina [1]

Mature prd-miR-993-3p

Accession MIMAT0030617
Description Panagrellus redivivus prd-miR-993-3p mature miRNA
Sequence 36 - UAAGCUCGCUUCUACAGGAUU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295