Stem-loop prd-mir-7939i

Accession

MI0025639

Description

Panagrellus redivivus prd-mir-7939i precursor miRNA

Gene family

MIPF0001646; mir-7939

Sequence

UAUGGGCCCUCAUGACAAUCUUGuuaucacuaaaaucaUGAAUGUUAUGAAGGCCCAUGGC
((((((((.((((((((.((.((.............)).)).)))))))).))))))))..

Structure

--        C        A  U  uuauc 
  UAUGGGCC UCAUGACA UC UG     a
  |||||||| |||||||| || ||     c
  GUACCCGG AGUAUUGU AG ac     u
CG        A        A  U  uaaaa 

Annotation confidence Not enough data

Genome context

KB454973.1: 60302-60362 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7939i

Mature prd-miR-7939i-5p

• Accession: MIMAT0030636
• Description: Panagrellus redivivus prd-miR-7939i-5p mature miRNA
• Sequence: 1 - UAUGGGCCCUCAUGACAAUCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7939i-3p

• Accession: MIMAT0030637
• Description: Panagrellus redivivus prd-miR-7939i-3p mature miRNA
• Sequence: 39 - UGAAUGUUAUGAAGGCCCAUGGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295