Stem-loop prd-mir-7910a

Accession

MI0025640

Description

Panagrellus redivivus prd-mir-7910a precursor miRNA

Gene family

MIPF0001840; mir-7910

Sequence

UUUGAAAUGGUUCAGCUCCUAUUCaaggcgcgguuugaUUAGGACUUGCAUUUCAAAUGU
(((((((((...(((.(((((.(((((......))))).))))).))))))))))))...

Structure

---         GUU   C     U     gc 
   UUUGAAAUG   CAG UCCUA UCaag  g
   |||||||||   ||| ||||| |||||   
   AAACUUUAC   GUU AGGAU aguuu  c
UGU         ---   C     U     gg 

Annotation confidence Not enough data

Genome context

KB455447.1: 271445-271504 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7910a

Mature prd-miR-7910a-5p

• Accession: MIMAT0030638
• Description: Panagrellus redivivus prd-miR-7910a-5p mature miRNA
• Sequence: 1 - UUUGAAAUGGUUCAGCUCCUAUUC - 24
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7910a-3p

• Accession: MIMAT0030639
• Description: Panagrellus redivivus prd-miR-7910a-3p mature miRNA
• Sequence: 39 - UUAGGACUUGCAUUUCAAAUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295