Stem-loop prd-mir-7911b

Accession

MI0025645

Description

Panagrellus redivivus prd-mir-7911b precursor miRNA

Gene family

MIPF0001858; mir-7911

Sequence

GCCCCCCGGAUGAUGCACCAUCGauugagguugaguuuaucGAUGUGCCUUGACCAGGGGUAG
..((((.((..((.((((.((((((.(((......))))))))))))).))..)).))))...

Structure

-GC    C  AU  U    C      u   gu 
   CCCC GG  GA GCAC AUCGau gag  u
   |||| ||  || |||| |||||| |||   
   GGGG CC  UU CGUG UAGcua uuu  g
GAU    A  AG  C    -      -   ga 

Annotation confidence Not enough data

Genome context

KB454982.1: 11795-11857 [+]

Mature prd-miR-7911b-5p

• Accession: MIMAT0030648
• Description: Panagrellus redivivus prd-miR-7911b-5p mature miRNA
• Sequence: 1 - GCCCCCCGGAUGAUGCACCAUCG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7911b-3p

• Accession: MIMAT0030649
• Description: Panagrellus redivivus prd-miR-7911b-3p mature miRNA
• Sequence: 42 - GAUGUGCCUUGACCAGGGGUAG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295