miRBase entry: prd-mir-7948c

Stem-loop prd-mir-7948c


Accession
MI0025651
Description
Panagrellus redivivus prd-mir-7948c precursor miRNA
Gene family
MIPF0001695; mir-7948


Sequence

CAUCGGCCCGAUGUUGCGUUGCUgugcgauuugaaaucagCAAACGCACAUCGGAUCUGUGAU
(((.((.(((((((.(((((((((.............)))).)))))))))))).)).)))..

Structure
--   C  C       U     -    ugcga 
  CAU GG CCGAUGU GCGUU GCUg     u
  ||| || ||||||| ||||| ||||     u
  GUG CU GGCUACA CGCAA Cgac     u
UA   U  A       -     A    uaaag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature prd-miR-7948c-5p

Accession MIMAT0030660
Description Panagrellus redivivus prd-miR-7948c-5p mature miRNA
Sequence 1 - CAUCGGCCCGAUGUUGCGUUGCU - 23
Evidence experimental
Illumina [1]

Mature prd-miR-7948c-3p

Accession MIMAT0030661
Description Panagrellus redivivus prd-miR-7948c-3p mature miRNA
Sequence 41 - CAAACGCACAUCGGAUCUGUGAU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295