miRBase entry: prd-mir-7917

Stem-loop prd-mir-7917


Accession
MI0025656
Description
Panagrellus redivivus prd-mir-7917 precursor miRNA


Sequence

UUGUCCAUGAUAUUCCCUUAACGuguuuuuguaaucgUGAAGGUCAUAUCCCAUGGGCAAG
(((((((((((((..((((.(((.(((.....)))))).))))..)))))..)))))))).

Structure
-        --     UC    A   u   u 
 UUGUCCAU  GAUAU  CCUU ACG guu u
 ||||||||  |||||  |||| ||| ||| u
 AACGGGUA  CUAUA  GGAA Ugc uaa g
G        CC     CU    G   -   u 


Annotation confidence Not enough data
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Genome context
KB455561.1: 457323-457383 [+]

Database links

Mature prd-miR-7917-5p

Accession MIMAT0030670
Description Panagrellus redivivus prd-miR-7917-5p mature miRNA
Sequence 1 - UUGUCCAUGAUAUUCCCUUAACG - 23
Evidence experimental
Illumina [1]

Mature prd-miR-7917-3p

Accession MIMAT0030671
Description Panagrellus redivivus prd-miR-7917-3p mature miRNA
Sequence 38 - UGAAGGUCAUAUCCCAUGGGCAAG - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295