Stem-loop prd-mir-7919

Accession

MI0025660

Description

Panagrellus redivivus prd-mir-7919 precursor miRNA

Sequence

UAAUGCGUGUAAUAAGUACUGUauugauguugaaauuCAGCACUUAUCACAUGCAAUGCG
...(((((((.((((((.(((.(((........))).))).)))))).))))))).....

Structure

--UAA       A      A   U   gau 
     UGCGUGU AUAAGU CUG auu   g
     ||||||| |||||| ||| |||    
     ACGUACA UAUUCA GAC uaa   u
GCGUA       C      C   u   agu 

Annotation confidence Not enough data

Genome context

KB455499.1: 53527-53586 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from prd-mir-7919

Mature prd-miR-7919-5p

• Accession: MIMAT0030678
• Description: Panagrellus redivivus prd-miR-7919-5p mature miRNA
• Sequence: 1 - UAAUGCGUGUAAUAAGUACUGU - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7919-3p

• Accession: MIMAT0030679
• Description: Panagrellus redivivus prd-miR-7919-3p mature miRNA
• Sequence: 38 - CAGCACUUAUCACAUGCAAUGCG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295