Stem-loop prd-mir-7920

Accession

MI0025662

Description

Panagrellus redivivus prd-mir-7920 precursor miRNA

Sequence

UGUUUUCAAUUCAUAGUAACGCagcgcgcgauugcGGUACUGUGCGUUGAAAAAUAUG
..((((((((.(((((((.((((((....).))))).))))))).)))))))).....

Structure

---UG        U       A     - g 
     UUUUCAAU CAUAGUA CGCag c c
     |||||||| ||||||| ||||| |  
     AAAAGUUG GUGUCAU Gcguu g g
GUAUA        C       G     a c 

Annotation confidence Not enough data

Genome context

KB455053.1: 2495-2552 [-]

Mature prd-miR-7920-5p

• Accession: MIMAT0030682
• Description: Panagrellus redivivus prd-miR-7920-5p mature miRNA
• Sequence: 1 - UGUUUUCAAUUCAUAGUAACGC - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7920-3p

• Accession: MIMAT0030683
• Description: Panagrellus redivivus prd-miR-7920-3p mature miRNA
• Sequence: 36 - GGUACUGUGCGUUGAAAAAUAUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295