Stem-loop prd-mir-81

Accession

MI0025665

Description

Panagrellus redivivus prd-mir-81 precursor miRNA

Sequence

UGGGUCUAGCCUUGAAAUCAUGuuuguugucuuuucaUGAGAUCAAAAGUUAGACUCAUU
((((((((((.((((..(((((.............)))))..))))..))))))))))..

Structure

--          -C    AA     uuugu 
  UGGGUCUAGC  UUGA  UCAUG     u
  ||||||||||  ||||  |||||     g
  ACUCAGAUUG  AACU  AGUac     u
UU          AA    AG     uuuuc 

Annotation confidence Not enough data

Genome context

KB455444.1: 63336-63395 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-81

Mature prd-miR-81-5p

• Accession: MIMAT0030688
• Description: Panagrellus redivivus prd-miR-81-5p mature miRNA
• Sequence: 1 - UGGGUCUAGCCUUGAAAUCAUG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-81-3p

• Accession: MIMAT0030689
• Description: Panagrellus redivivus prd-miR-81-3p mature miRNA
• Sequence: 38 - UGAGAUCAAAAGUUAGACUCAUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295