Stem-loop prd-mir-7923

Accession

MI0025666

Description

Panagrellus redivivus prd-mir-7923 precursor miRNA

Sequence

CCGGCCUCCGUCUGCUUACUgagcugauuuuggaaucgagUAAGUAAUCGGUGGUUGGCG
((((((.(((..((((((((((.((......))..)).))))))))..))).))))))..

Structure

--      U   UC        -  -g  ga 
  CCGGCC CCG  UGCUUACU ga  cu  u
  |||||| |||  |||||||| ||  ||   
  GGUUGG GGC  AUGAAUga cu  gg  u
GC      U   UA        g  aa  uu 

Annotation confidence Not enough data

Genome context

KB455376.1: 145052-145111 [-]

Mature prd-miR-7923-5p

• Accession: MIMAT0030690
• Description: Panagrellus redivivus prd-miR-7923-5p mature miRNA
• Sequence: 1 - CCGGCCUCCGUCUGCUUACU - 20
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7923-3p

• Accession: MIMAT0030691
• Description: Panagrellus redivivus prd-miR-7923-3p mature miRNA
• Sequence: 41 - UAAGUAAUCGGUGGUUGGCG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295