Stem-loop prd-mir-7883c

Accession

MI0025669

Description

Panagrellus redivivus prd-mir-7883c precursor miRNA

Sequence

AUUUGAGUUCACGGUGUACCUUGaauuaccguuacaAGGUGCAUCGUGGACUCAAAUAU
((((((((((((((((((((((((((....))).)))))))))))))))))))))))..

Structure

--                       -   u 
  AUUUGAGUUCACGGUGUACCUUG aau a
  ||||||||||||||||||||||| |||  
  UAAACUCAGGUGCUACGUGGAac uug c
UA                       a   c 

Annotation confidence Not enough data

Genome context

KB455460.1: 1965685-1965743 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7883c

Mature prd-miR-7883c-5p

• Accession: MIMAT0030696
• Description: Panagrellus redivivus prd-miR-7883c-5p mature miRNA
• Sequence: 1 - AUUUGAGUUCACGGUGUACCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7883c-3p

• Accession: MIMAT0030697
• Description: Panagrellus redivivus prd-miR-7883c-3p mature miRNA
• Sequence: 37 - AGGUGCAUCGUGGACUCAAAUAU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295