Stem-loop prd-mir-7927e

Accession

MI0025672

Description

Panagrellus redivivus prd-mir-7927e precursor miRNA

Gene family

MIPF0001660; mir-7927

Sequence

CGGAGCGUUUCUCUGACUGAUgugauaacaguuaUCAGUCAUUGAAGUGAUCUCGU
((((.((((((..(((((((((..........)))))))))..)))))).)).)).

Structure

-  -  G      UC         ugau 
 CG GA CGUUUC  UGACUGAUg    a
 || || ||||||  |||||||||     
 GC CU GUGAAG  ACUGACUau    a
U  U  A      UU         ugac 

Annotation confidence Not enough data

Genome context

KB455431.1: 49004-49059 [-]

Mature prd-miR-7927e-5p

• Accession: MIMAT0030702
• Description: Panagrellus redivivus prd-miR-7927e-5p mature miRNA
• Sequence: 1 - CGGAGCGUUUCUCUGACUGAU - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7927e-3p

• Accession: MIMAT0030703
• Description: Panagrellus redivivus prd-miR-7927e-3p mature miRNA
• Sequence: 35 - UCAGUCAUUGAAGUGAUCUCGU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295