Stem-loop prd-mir-7931

Accession

MI0025676

Description

Panagrellus redivivus prd-mir-7931 precursor miRNA

Sequence

GGGGGCAGGGGAAGACAGAaaaaagcgggugccauaucgauuUCCUGAGCCUCCUCUGUCCCCG
((((((((((((...(((.(((...(((........))).))).)))....)))))))))))).

Structure

-            -AGA   A   aag   gug 
 GGGGGCAGGGGA    CAG aaa   cgg   c
 ||||||||||||    ||| |||   |||    
 CCCCUGUCUCCU    GUC Uuu   gcu   c
G            CCGA   C   --a   aua 

Annotation confidence Not enough data

Genome context

KB455029.1: 470784-470847 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7931

Mature prd-miR-7931-5p

• Accession: MIMAT0030710
• Description: Panagrellus redivivus prd-miR-7931-5p mature miRNA
• Sequence: 1 - GGGGGCAGGGGAAGACAGA - 19
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7931-3p

• Accession: MIMAT0030711
• Description: Panagrellus redivivus prd-miR-7931-3p mature miRNA
• Sequence: 43 - UCCUGAGCCUCCUCUGUCCCCG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295