Stem-loop prd-mir-7950c

Accession

MI0025677

Description

Panagrellus redivivus prd-mir-7950c precursor miRNA

Sequence

GAGUUCAUGUUUUUUGCUGAUUauuuguuugaaauuaGCCGGCGAAAGAGUUGAACUC
(((((((..((((((((((.(((.((......)).))).))))))))))..)))))))

Structure

       UG          A   u  gu 
GAGUUCA  UUUUUUGCUG UUa uu  u
|||||||  |||||||||| ||| ||   
CUCAAGU  AGAAAGCGGC Gau aa  u
       UG          C   u  ag 

Annotation confidence Not enough data

Genome context

KB455046.1: 28725-28782 [-]

Mature prd-miR-7950c-5p

• Accession: MIMAT0030712
• Description: Panagrellus redivivus prd-miR-7950c-5p mature miRNA
• Sequence: 1 - GAGUUCAUGUUUUUUGCUGAUU - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7950c-3p

• Accession: MIMAT0030713
• Description: Panagrellus redivivus prd-miR-7950c-3p mature miRNA
• Sequence: 38 - GCCGGCGAAAGAGUUGAACUC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295