Stem-loop prd-mir-7933

Accession

MI0025680

Description

Panagrellus redivivus prd-mir-7933 precursor miRNA

Sequence

AGCAGCCUCAAUGGUGGCAAAUGuuuuaaaugauucaUUUGCGACUGUUAAUCUGCUUU
(((((....((((((.(((((((..((....))..))))))).))))))...)))))..

Structure

--     CCUC      G       uu  a 
  AGCAG    AAUGGU GCAAAUG  uu a
  |||||    |||||| |||||||  ||  
  UCGUC    UUGUCA CGUUUac  ag a
UU     -UAA      G       uu  u 

Annotation confidence Not enough data

Genome context

KB455493.1: 669128-669186 [-]

Mature prd-miR-7933-5p

• Accession: MIMAT0030718
• Description: Panagrellus redivivus prd-miR-7933-5p mature miRNA
• Sequence: 1 - AGCAGCCUCAAUGGUGGCAAAUG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7933-3p

• Accession: MIMAT0030719
• Description: Panagrellus redivivus prd-miR-7933-3p mature miRNA
• Sequence: 38 - UUUGCGACUGUUAAUCUGCUUU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295