Stem-loop prd-mir-7934

Accession

MI0025682

Description

Panagrellus redivivus prd-mir-7934 precursor miRNA

Sequence

GAGGUUUCUGAUGUGCAUGCACagugcaaacacaauccugUAAUGCCCUUAAGAAAUCUCA
(((((((((...(.((((..((((.............)))).)))).)...))))))))).

Structure

-         GAU U    GC    ugcaa 
 GAGGUUUCU   G GCAU  ACag     a
 |||||||||   | ||||  ||||     c
 CUCUAAAGA   C CGUA  Uguc     a
A         AUU C    -A    cuaac 

Annotation confidence Not enough data

Genome context

KB455188.1: 52233-52293 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from prd-mir-7934

Mature prd-miR-7934-5p

• Accession: MIMAT0030722
• Description: Panagrellus redivivus prd-miR-7934-5p mature miRNA
• Sequence: 1 - GAGGUUUCUGAUGUGCAUGCAC - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7934-3p

• Accession: MIMAT0030723
• Description: Panagrellus redivivus prd-miR-7934-3p mature miRNA
• Sequence: 41 - UAAUGCCCUUAAGAAAUCUCA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295