Stem-loop prd-mir-7910b

Accession

MI0025683

Description

Panagrellus redivivus prd-mir-7910b precursor miRNA

Gene family

MIPF0001840; mir-7910

Sequence

UUUGAAAUGGCGCAGUCCCUAUUcaacggcgguuugaUUAGGCCUUGCUUCAUUUCAAAU
((((((((((.((((..((((.(((((....).)))).))))..)))).)))))))))).

Structure

-          C    UC    U    - g 
 UUUGAAAUGG GCAG  CCUA Ucaa c g
 |||||||||| ||||  |||| |||| |  
 AAACUUUACU CGUU  GGAU aguu g c
U          U    CC    U    u g 

Annotation confidence Not enough data

Genome context

KB455419.1: 93805-93864 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7910b

Mature prd-miR-7910b-5p

• Accession: MIMAT0030724
• Description: Panagrellus redivivus prd-miR-7910b-5p mature miRNA
• Sequence: 1 - UUUGAAAUGGCGCAGUCCCUAUU - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7910b-3p

• Accession: MIMAT0030725
• Description: Panagrellus redivivus prd-miR-7910b-3p mature miRNA
• Sequence: 38 - UUAGGCCUUGCUUCAUUUCAAAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295