miRBase entry: prd-mir-7942

Stem-loop prd-mir-7942


Accession
MI0025693
Description
Panagrellus redivivus prd-mir-7942 precursor miRNA


Sequence

CGCGCGGACAGUCAUCGACUAGuguauucgcauucuAGUCGUUGACUGUCUCUGCGGU
((((.(((((((((.((((((((((....)))..))))))).))))))))).))))..

Structure
--    C         U       --   a 
  CGCG GGACAGUCA CGACUAG  ugu u
  |||| ||||||||| |||||||  |||  
  GCGU UCUGUCAGU GCUGAuc  acg u
UG    C         U       uu   c 


Annotation confidence Not enough data
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Genome context
KB455349.1: 150816-150873 [-]

Database links

Mature prd-miR-7942-5p

Accession MIMAT0030744
Description Panagrellus redivivus prd-miR-7942-5p mature miRNA
Sequence 1 - CGCGCGGACAGUCAUCGACUAG - 22
Evidence experimental
Illumina [1]

Mature prd-miR-7942-3p

Accession MIMAT0030745
Description Panagrellus redivivus prd-miR-7942-3p mature miRNA
Sequence 37 - AGUCGUUGACUGUCUCUGCGGU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295