Stem-loop prd-mir-7943

Accession

MI0025694

Description

Panagrellus redivivus prd-mir-7943 precursor miRNA

Sequence

AUCUUACACACAGCAUACCCACUugacauuuacauagUGGAAUGUGGUGUGUAAUGCCG
...((((((((.((((..(((((((.......)).))))).)))).)))))))).....

Structure

--AUC        A    AC     -  ac 
     UUACACAC GCAU  CCACU ug  a
     |||||||| ||||  ||||| ||  u
     AAUGUGUG UGUA  GGUga ac  u
GCCGU        G    -A     u  au 

Annotation confidence Not enough data

Genome context

KB455193.1: 30442-30500 [-]

Mature prd-miR-7943-5p

• Accession: MIMAT0030746
• Description: Panagrellus redivivus prd-miR-7943-5p mature miRNA
• Sequence: 1 - AUCUUACACACAGCAUACCCACU - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7943-3p

• Accession: MIMAT0030747
• Description: Panagrellus redivivus prd-miR-7943-3p mature miRNA
• Sequence: 38 - UGGAAUGUGGUGUGUAAUGCCG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295