miRBase entry: prd-mir-7945

Stem-loop prd-mir-7945


Accession
MI0025696
Description
Panagrellus redivivus prd-mir-7945 precursor miRNA


Sequence

UACUGUAUUUGGUCGUUUAAAGguugcaaguacgcuUCAAAGGACCUUAUACAGGAUG
..((((((..((((.(((.(((((.......)).))).))).))))..))))))....

Structure
--UA      UU    G   A   -  ug 
    CUGUAU  GGUC UUU AAG gu  c
    ||||||  |||| ||| ||| ||  a
    GACAUA  CCAG AAA Uuc ca  a
GUAG      UU    G   C   g  ug 


Annotation confidence Not enough data
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Genome context
KB455536.1: 304836-304893 [+]

Database links

Mature prd-miR-7945-5p

Accession MIMAT0030750
Description Panagrellus redivivus prd-miR-7945-5p mature miRNA
Sequence 1 - UACUGUAUUUGGUCGUUUAAAG - 22
Evidence experimental
Illumina [1]

Mature prd-miR-7945-3p

Accession MIMAT0030751
Description Panagrellus redivivus prd-miR-7945-3p mature miRNA
Sequence 37 - UCAAAGGACCUUAUACAGGAUG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295