Stem-loop prd-mir-7946

Accession

MI0025697

Description

Panagrellus redivivus prd-mir-7946 precursor miRNA

Sequence

GUGAGUUUCUUUUACAUCAAGaaguuguggcuucUCGAUAUGAAAGUAAGCUUACAG
((((((((((((((.(((.((((((....)))))).))).)))))).))))))))..

Structure

--        -      C   A      u 
  GUGAGUUU CUUUUA AUC AGaagu g
  |||||||| |||||| ||| ||||||  
  CAUUCGAA GAAAGU UAG Ucuucg u
GA        U      A   C      g 

Annotation confidence Not enough data

Genome context

KB455447.1: 279668-279724 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7946

Mature prd-miR-7946-5p

• Accession: MIMAT0030752
• Description: Panagrellus redivivus prd-miR-7946-5p mature miRNA
• Sequence: 1 - GUGAGUUUCUUUUACAUCAAG - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7946-3p

• Accession: MIMAT0030753
• Description: Panagrellus redivivus prd-miR-7946-3p mature miRNA
• Sequence: 35 - UCGAUAUGAAAGUAAGCUUACAG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295