Stem-loop prd-mir-7948d

Accession

MI0025704

Description

Panagrellus redivivus prd-mir-7948d precursor miRNA

Sequence

CGGUGAUCCCAUGUUGCGUUUCUGuggauaauugaguucaGCAAUGUGCACGGGAUCAAUGAC
((.(((((((.(((.(((((....(((((......)))))..)))))))).))))))).))..

Structure

--  G       A   U     UCUG     aa 
  CG UGAUCCC UGU GCGUU    uggau  u
  || ||||||| ||| |||||    |||||   
  GU ACUAGGG ACG UGUAA    acuug  u
CA  A       C   -     --CG     ag 

Annotation confidence Not enough data

Genome context

KB455224.1: 15721-15783 [-]

Mature prd-miR-7948d-5p

• Accession: MIMAT0030766
• Description: Panagrellus redivivus prd-miR-7948d-5p mature miRNA
• Sequence: 1 - CGGUGAUCCCAUGUUGCGUUUCUG - 24
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7948d-3p

• Accession: MIMAT0030767
• Description: Panagrellus redivivus prd-miR-7948d-3p mature miRNA
• Sequence: 41 - GCAAUGUGCACGGGAUCAAUGAC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295