Stem-loop prd-mir-7957a

Accession

MI0025710

Description

Panagrellus redivivus prd-mir-7957a precursor miRNA

Gene family

MIPF0001668; mir-7957

Sequence

AGUUUGUCCUUGGUCAUAUUGCuguuuuuuguuaucugcAAAUUUGCCAAGGACGAAAUAC
..((((((((((((....((((...............))))....))))))))))))....

Structure

--AG            CAUA    uguuuu 
    UUUGUCCUUGGU    UUGC      u
    ||||||||||||    ||||      u
    AAGCAGGAACCG    AAcg      g
CAUA            UUUA    ucuauu 

Annotation confidence Not enough data

Genome context

KB455532.1: 355713-355773 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7957a

Mature prd-miR-7957a-5p

• Accession: MIMAT0030776
• Description: Panagrellus redivivus prd-miR-7957a-5p mature miRNA
• Sequence: 1 - AGUUUGUCCUUGGUCAUAUUGC - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7957a-3p

• Accession: MIMAT0030777
• Description: Panagrellus redivivus prd-miR-7957a-3p mature miRNA
• Sequence: 40 - AAAUUUGCCAAGGACGAAAUAC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295