Stem-loop prd-mir-7918c

Accession

MI0025713

Description

Panagrellus redivivus prd-mir-7918c precursor miRNA

Gene family

MIPF0001655; mir-7918

Sequence

AUUUGGCUCUGAAGUCUUGCUGuguggauugaaauccAGCAAGUUUCAGAGCUUUUUG
....((((((((((.(((((((.((........)).))))))))))))))))).....

Structure

-AUUU          U       u  gga 
     GGCUCUGAAG CUUGCUG gu   u
     |||||||||| ||||||| ||    
     UCGAGACUUU GAACGAc ua   u
GUUUU          -       c  aag 

Annotation confidence Not enough data

Genome context

KB455537.1: 13165-13222 [+]

Mature prd-miR-7918c-5p

• Accession: MIMAT0030782
• Description: Panagrellus redivivus prd-miR-7918c-5p mature miRNA
• Sequence: 1 - AUUUGGCUCUGAAGUCUUGCUG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7918c-3p

• Accession: MIMAT0030783
• Description: Panagrellus redivivus prd-miR-7918c-3p mature miRNA
• Sequence: 38 - AGCAAGUUUCAGAGCUUUUUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295