Stem-loop prd-mir-124

Accession

MI0025715

Description

Panagrellus redivivus prd-mir-124 precursor miRNA

Gene family

MIPF0000021; mir-124

Sequence

GGGUUUUCACGGUGACUUCAGUgagaauuaaaucaacUAAGGCACGCGGUGAAUGCCAAU
.(((.(((((.(((.(((.(((((........)).))).)))..))).))))).)))...

Structure

--G   U     G   -A   C   -  gaa 
   GGU UUCAC GUG  CUU AGU ga   u
   ||| ||||| |||  ||| ||| ||    
   CCG AAGUG CGC  GGA Uca cu   u
UAA   U     G   AC   A   a  aaa 

Annotation confidence Not enough data

Genome context

KB455225.1: 111621-111680 [-]

Mature prd-miR-124-5p

• Accession: MIMAT0030786
• Description: Panagrellus redivivus prd-miR-124-5p mature miRNA
• Sequence: 1 - GGGUUUUCACGGUGACUUCAGU - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-124-3p

• Accession: MIMAT0030787
• Description: Panagrellus redivivus prd-miR-124-3p mature miRNA
• Sequence: 38 - UAAGGCACGCGGUGAAUGCCAAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295