Stem-loop prd-mir-234

Accession

MI0025718

Description

Panagrellus redivivus prd-mir-234 precursor miRNA

Gene family

MIPF0000315; mir-234

Sequence

CGGUAUUCUCGGGUAAUGACaguguucaagugcgugUUAUUGCUUGAGAAUACAAAU
..(((((((((((((((((((.(((......))))))))))))))))))))))....

Structure

--CG                   g   uc 
    GUAUUCUCGGGUAAUGACa ugu  a
    ||||||||||||||||||| |||   
    CAUAAGAGUUCGUUAUUgu gcg  a
UAAA                   -   ug 

Annotation confidence Not enough data

Genome context

KB455320.1: 163967-164023 [-]

Mature prd-miR-234-5p

• Accession: MIMAT0030792
• Description: Panagrellus redivivus prd-miR-234-5p mature miRNA
• Sequence: 1 - CGGUAUUCUCGGGUAAUGAC - 20
• Evidence: experimental ; Illumina [1]

Mature prd-miR-234-3p

• Accession: MIMAT0030793
• Description: Panagrellus redivivus prd-miR-234-3p mature miRNA
• Sequence: 37 - UUAUUGCUUGAGAAUACAAAU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295