Stem-loop prd-mir-7954

Accession

MI0025719

Description

Panagrellus redivivus prd-mir-7954 precursor miRNA

Sequence

GUAAUGCGUUUCUGUUAUUUGUaccauaggucgcauUAAUAACGGAAAACAUUACAG
((((((..(((((((((((((((((...))).)))..))))))))))).))))))..

Structure

--      CG           --   -   a 
  GUAAUG  UUUCUGUUAUU  UGU acc  
  ||||||  |||||||||||  ||| ||| u
  CAUUAC  AAAGGCAAUAA  acg ugg  
GA      -A           Uu   c   a 

Annotation confidence Not enough data

Genome context

KB455550.1: 230017-230073 [+]

Mature prd-miR-7954-5p

• Accession: MIMAT0030794
• Description: Panagrellus redivivus prd-miR-7954-5p mature miRNA
• Sequence: 1 - GUAAUGCGUUUCUGUUAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7954-3p

• Accession: MIMAT0030795
• Description: Panagrellus redivivus prd-miR-7954-3p mature miRNA
• Sequence: 37 - UAAUAACGGAAAACAUUACAG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295