miRBase entry: prd-mir-7955

Stem-loop prd-mir-7955


Accession
MI0025720
Description
Panagrellus redivivus prd-mir-7955 precursor miRNA


Sequence

AGCGCGUAUGCGGUGACAUCUCgugaaaguuuaaacugaAAUGGCACCUUCAUCCGUGCACU
.(((((.(((.((((.(((.((((..........)).)).))).))))..))).)))))...

Structure
--A     U   -C    A   C  -  gaaa 
   GCGCG AUG  GGUG CAU UC gu    g
   ||||| |||  |||| ||| || ||     
   CGUGC UAC  CCAC GUA ag ca    u
UCA     C   UU    G   A  u  aauu 


Annotation confidence Not enough data
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Genome context
KB455424.1: 18608-18669 [+]

Database links

Mature prd-miR-7955-5p

Accession MIMAT0030796
Description Panagrellus redivivus prd-miR-7955-5p mature miRNA
Sequence 1 - AGCGCGUAUGCGGUGACAUCUC - 22
Evidence experimental
Illumina [1]

Mature prd-miR-7955-3p

Accession MIMAT0030797
Description Panagrellus redivivus prd-miR-7955-3p mature miRNA
Sequence 40 - AAUGGCACCUUCAUCCGUGCACU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295