Stem-loop prd-mir-7956

Accession

MI0025721

Description

Panagrellus redivivus prd-mir-7956 precursor miRNA

Sequence

GUGUCUAAUUCAGUACAAUGauaaaaauguugguaucUUUGUACUGUUUUAGACUCUUU
(.((((((..((((((((.((((..........)))).))))))))..)))))).)...

Structure

--- U      UU        U    aaaa 
   G GUCUAA  CAGUACAA Gaua    u
   | ||||||  |||||||| ||||     
   C CAGAUU  GUCAUGUU cuau    g
UUU U      UU        U    gguu 

Annotation confidence Not enough data

Genome context

KB455485.1: 83030-83088 [+]

Mature prd-miR-7956-5p

• Accession: MIMAT0030798
• Description: Panagrellus redivivus prd-miR-7956-5p mature miRNA
• Sequence: 1 - GUGUCUAAUUCAGUACAAUG - 20
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7956-3p

• Accession: MIMAT0030799
• Description: Panagrellus redivivus prd-miR-7956-3p mature miRNA
• Sequence: 38 - UUUGUACUGUUUUAGACUCUUU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295