miRBase entry: prd-mir-7958

Stem-loop prd-mir-7958


Accession
MI0025723
Description
Panagrellus redivivus prd-mir-7958 precursor miRNA


Sequence

CAGAAAGUUAUGGGGUCAAUAUGugcacgaugcauucaUACUGGCCCUUCAAGUUUCUC
.(((((.((..(((((((.((((((((...))))..)))).)))))))..)).))))).

Structure
C     G  AU       A    --    c 
 AGAAA UU  GGGGUCA UAUG  ugca  
 ||||| ||  ||||||| ||||  |||| g
 UCUUU AA  UCCCGGU AUac  acgu  
C     G  CU       C    uu    a 


Annotation confidence Not enough data
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Genome context
KB454983.1: 184997-185055 [-]

Database links

Mature prd-miR-7958-5p

Accession MIMAT0030802
Description Panagrellus redivivus prd-miR-7958-5p mature miRNA
Sequence 1 - CAGAAAGUUAUGGGGUCAAUAUG - 23
Evidence experimental
Illumina [1]

Mature prd-miR-7958-3p

Accession MIMAT0030803
Description Panagrellus redivivus prd-miR-7958-3p mature miRNA
Sequence 39 - UACUGGCCCUUCAAGUUUCUC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295