Stem-loop prd-mir-7959b

Accession

MI0025724

Description

Panagrellus redivivus prd-mir-7959b precursor miRNA

Sequence

CAAAAGUUUAAGUGCAAGCACaguuguugcuacaugugUACUAGCACUUUAACUUUUGAG
((((((((.((((((.((.(((..(((....)))..))).)).)))))).))))))))..

Structure

--        U      A  C   gu   u 
  CAAAAGUU AAGUGC AG ACa  ugu g
  |||||||| |||||| || |||  |||  
  GUUUUCAA UUCACG UC Ugu  aca c
GA        U      A  A   gu   u 

Annotation confidence Not enough data

Genome context

KB455561.1: 619003-619062 [+]

Mature prd-miR-7959b-5p

• Accession: MIMAT0030804
• Description: Panagrellus redivivus prd-miR-7959b-5p mature miRNA
• Sequence: 1 - CAAAAGUUUAAGUGCAAGCAC - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7959b-3p

• Accession: MIMAT0030805
• Description: Panagrellus redivivus prd-miR-7959b-3p mature miRNA
• Sequence: 39 - UACUAGCACUUUAACUUUUGAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295