Stem-loop prd-mir-7960

Accession

MI0025729

Description

Panagrellus redivivus prd-mir-7960 precursor miRNA

Sequence

AGUAUUACAGCUCUUUCCAAAGcccguauuugauaacuUUGGCAAGAUUUGUAAAUACUAG
((((((((((.((((.((((((..............)))))).)))).)))).))))))..

Structure

--      -    C    U      cccgua 
  AGUAUU ACAG UCUU CCAAAG      u
  |||||| |||| |||| ||||||       
  UCAUAA UGUU AGAA GGUUuc      u
GA      A    U    C      aauagu 

Annotation confidence Not enough data

Genome context

KB455315.1: 475794-475854 [+]

Mature prd-miR-7960-5p

• Accession: MIMAT0030814
• Description: Panagrellus redivivus prd-miR-7960-5p mature miRNA
• Sequence: 1 - AGUAUUACAGCUCUUUCCAAAG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7960-3p

• Accession: MIMAT0030815
• Description: Panagrellus redivivus prd-miR-7960-3p mature miRNA
• Sequence: 39 - UUGGCAAGAUUUGUAAAUACUAG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295