Stem-loop prd-mir-7961-2

Accession

MI0025733

Description

Panagrellus redivivus prd-mir-7961-2 precursor miRNA

Gene family

MIPF0001832; mir-7961

Sequence

AAACUAACUUCGAUGGGUUUGuuauacguaaaucaGUCCCACCGUUGUGAGUUUGU
(((((.((..((.((((.(((............))).)))).))..)).)))))..

Structure

--     A  UU  A    U   uuaua 
  AAACU AC  CG UGGG UUG     c
  ||||| ||  || |||| |||      
  UUUGA UG  GC ACCC Gac     g
UG     G  UU  C    U   uaaau 

Annotation confidence Not enough data

Genome context

KB455479.1: 197605-197660 [+]

Mature prd-miR-7961-5p

• Accession: MIMAT0030820
• Description: Panagrellus redivivus prd-miR-7961-5p mature miRNA
• Sequence: 1 - AAACUAACUUCGAUGGGUUUG - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7961-3p

• Accession: MIMAT0030821
• Description: Panagrellus redivivus prd-miR-7961-3p mature miRNA
• Sequence: 36 - GUCCCACCGUUGUGAGUUUGU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295