Stem-loop prd-mir-7957c

Accession

MI0025734

Description

Panagrellus redivivus prd-mir-7957c precursor miRNA

Gene family

MIPF0001668; mir-7957

Sequence

UUUGUCCUUGGUUUUAUUGCUGuuuuuuguuaucuGUAAUUUGCCGAGGACGAAAU
((((((((((((...(((((...............)))))..))))))))))))..

Structure

--            UUU     UGuuuu 
  UUUGUCCUUGGU   AUUGC      u
  ||||||||||||   |||||      u
  AAGCAGGAGCCG   UAAUG      g
UA            -UU     ucuauu 

Annotation confidence Not enough data

Genome context

KB455516.1: 94909-94964 [-]

Mature prd-miR-7957c-5p

• Accession: MIMAT0030822
• Description: Panagrellus redivivus prd-miR-7957c-5p mature miRNA
• Sequence: 1 - UUUGUCCUUGGUUUUAUUGCUG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7957c-3p

• Accession: MIMAT0030823
• Description: Panagrellus redivivus prd-miR-7957c-3p mature miRNA
• Sequence: 36 - GUAAUUUGCCGAGGACGAAAU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295