Stem-loop prd-mir-7964a

Accession

MI0025737

Description

Panagrellus redivivus prd-mir-7964a precursor miRNA

Gene family

MIPF0001749; mir-7964

Sequence

UAGCCGUGUUUGGGACCCgugaagcgaccggGUCAACCACUCGCUGCUACC
((((.(((..(((((((((.(......)))))))..)))..))).))))..

Structure

--    C   UU   --      u aa 
  UAGC GUG  UGG  GACCCg g  g
  |||| |||  |||  |||||| |   
  AUCG CGC  ACC  CUGggc c  c
CC    U   UC   AA      - ag 

Annotation confidence Not enough data

Genome context

KB455532.1: 589933-589983 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7964a

Mature prd-miR-7964a-5p

• Accession: MIMAT0030828
• Description: Panagrellus redivivus prd-miR-7964a-5p mature miRNA
• Sequence: 1 - UAGCCGUGUUUGGGACCC - 18
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7964a-3p

• Accession: MIMAT0030829
• Description: Panagrellus redivivus prd-miR-7964a-3p mature miRNA
• Sequence: 32 - GUCAACCACUCGCUGCUACC - 51
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295