miRBase entry: prd-mir-7969

Stem-loop prd-mir-7969


Accession
MI0025743
Description
Panagrellus redivivus prd-mir-7969 precursor miRNA


Sequence

CUGUGCCCCUUUUCUGUGCCGugauuuguuacucgACAAAGAUAAGGCGGCUCAGCG
(((.(((((((.(((.((.((.(........).)).)).))).)))).))).)))..

Structure
--   U   -    U   G  C  u auu 
  CUG GCC CCUU UCU UG CG g   u
  ||| ||| |||| ||| || || |    
  GAC CGG GGAA AGA AC gc c   g
GC   U   C    U   A  A  u auu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB455530.1: 25373-25429 [-]

Database links

Mature prd-miR-7969-5p

Accession MIMAT0030840
Description Panagrellus redivivus prd-miR-7969-5p mature miRNA
Sequence 1 - CUGUGCCCCUUUUCUGUGCCG - 21
Evidence experimental
Illumina [1]

Mature prd-miR-7969-3p

Accession MIMAT0030841
Description Panagrellus redivivus prd-miR-7969-3p mature miRNA
Sequence 36 - ACAAAGAUAAGGCGGCUCAGCG - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295