miRBase entry: rgl-MIR7972

Stem-loop rgl-MIR7972


Accession
MI0025746
Description
Rehmannia glutinosa rgl-MIR7972 precursor miRNA


Sequence

cugaaucgaaggaaaauuucaagcuugacaaauacgucuuccauggcguccgucccaaaccagucuuccuauauguggaaaggguacacaaaggaagaaaggauacacaaaagacuagcaaaauaguccacaauacucuuuccaccauuuuuaagggagucagucuuauUUGUCAGGCUUGUUAUUCUCCuucgauggcg
....(((((((((.(((..(((((((((((((((((((......))))...........((..(((((((...((((.........)))).)))))))..))..........(((((......)))))......(((((((............)))))))......)))))))))))))))..))).)))))))))....

Structure
cuga         a   uu               ---------------------------------------cgucuuccauggcguccgucccaaa  ag       aua    gaa 
    aucgaagga aau  caagcuugacaaaua                                                                cc  ucuuccu   ugug   a
    ||||||||| |||  |||||||||||||||                                                                ||  |||||||   ||||   g
    uagcuuCCU UUA  GUUCGGACUGUUuau                                                                gg  agaagga   acac   g
gcgg         C   UU               ucugacugagggaauuuuuaccaccuuucucauaacaccugauaaaacgaucagaaaacacaua  aa       --a    aug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature rgl-miR7972

Accession MIMAT0032261
Description Rehmannia glutinosa rgl-miR7972 mature miRNA
Sequence 170 - UUGUCAGGCUUGUUAUUCUCC - 190
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23861915
    Transcriptome/degradome-wide identification of R. glutinosa miRNAs and their targets: the role of miRNA activity in the replanting disease
    Li MJ, Yang YH, Chen XJ, Wang FQ, Lin WX, Yi YJ, Zeng L, Yang SY, Zhang ZY
    PLoS One (2013) 8:e68531