Stem-loop sequence hsa-mir-548ba

Accession

MI0025747 (change log)

Symbol

HGNC:MIR548BA

Description

Homo sapiens miR-548ba stem-loop

Gene family

MIPF0000317; mir-548

Literature search

41 open access papers mention hsa-mir-548ba
(141 sentences)

Stem-loop

   a       c   ga            g 
5'  aagguaa ugu  uuuuugcuauua a
    ||||||| |||  |||||||||||| a
3'  uuucauu acg  aaaaacgguaau a
   -       a   uc            g 

Deep sequencing

7798 reads, 8.8 reads per million, 125 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr2: 49059603-49059658 [+]
• Overlapping transcripts:

  intergenic

Database links

• HGNC:MIR548BA
• miRBase Tracker:MI0025747

Mature sequence hsa-miR-548ba

• Accession: MIMAT0031175
• Sequence: 1 - aaagguaacugugauuuuugcu - 22
• Deep sequencing: 4733 reads, 79 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-548ba
  • miRDB:hsa-miR-548ba

References

1. PMID:23660593 "Research resource: small RNA-seq of human granulosa cells reveals miRNAs in FSHR and aromatase genes" Velthut-Meikas A, Simm J, Tuuri T, Tapanainen JS, Metsis M, Salumets A Mol Endocrinol. 27:1128-1141(2013).