miRBase entry: stu-MIR5303c

Stem-loop stu-MIR5303c


Accession
MI0025764
Description
Solanum tuberosum stu-MIR5303c precursor miRNA
Gene family
MIPF0001432; MIR5303

Literature search
3 open access papers mention stu-MIR5303c
(7 sentences)

Sequence

acccgugucggguucuccaaaaauacacuacUUUUGGAGAAUCCGACACGCACCC
...(((((((((((((((((((.........))))))))))))))))))).....

Structure
--acc                   aua 
     cgugucggguucuccaaaa   c
     |||||||||||||||||||   a
     GCACAGCCUAAGAGGUUUU   c
CCCAC                   cau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH137893.1: 976272-976326 [+]

Database links

Mature stu-miR5303c

Accession MIMAT0030855
Description Solanum tuberosum stu-miR5303c mature miRNA
Sequence 32 - UUUUGGAGAAUCCGACACGCACCC - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233