miRBase entry: stu-MIR1886c

Stem-loop stu-MIR1886c


Accession
MI0025780
Description
Solanum tuberosum stu-MIR1886c precursor miRNA
Gene family
MIPF0001647; MIR1886

Literature search
2 open access papers mention stu-MIR1886c
(3 sentences)

Sequence

AUGGUAUCGUGAGAUGAAAUCAGCguuuggacaugcgauuuuacgcugauuucaucucaugauuccauau
((((.((((((((((((((((((((((((......)))....))))))))))))))))))))).))))..

Structure
--    U                     ----   ga 
  AUGG AUCGUGAGAUGAAAUCAGCgu    uug  c
  |||| |||||||||||||||||||||    |||   
  uacc uaguacucuacuuuagucgca    agc  a
ua    u                     uuuu   gu 


Annotation confidence Not enough data
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Genome context
JH137832.1: 2129719-2129788 [+]

Database links

Mature stu-miR1886c

Accession MIMAT0030871
Description Solanum tuberosum stu-miR1886c mature miRNA
Sequence 1 - AUGGUAUCGUGAGAUGAAAUCAGC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233