Stem-loop stu-MIR7993b

Accession

MI0025785

Description

Solanum tuberosum stu-MIR7993b precursor miRNA

Gene family

MIPF0001663; MIR7993

Sequence

UUAAGUUAACCACAUAAAAUAUGUuuaguuucuuuaguuauaugcagucaccucaauaagcuguaaaauccuagacauuaaagaugaggcauauacuuaaaguagacgauAUAUUUUAUGUGGUUAACUUAACU
(((((((((((((((((((((((((..((((((((((.(((((((..(((.((.......(((........))).......)).))).))))))).)))))).)))))))))))))))))))))))))))))..

Structure

--                         ua    -      u       ag   c  caauaag   uaa 
  UUAAGUUAACCACAUAAAAUAUGUu  guuu cuuuag uauaugc  uca cu       cug   a
  |||||||||||||||||||||||||  |||| |||||| |||||||  ||| ||       |||    
  AAUUCAAUUGGUGUAUUUUAUAuag  caga gaaauu auauacg  agu ga       gau   a
UC                         --    u      c       -g   a  aauuaca   ccu 

Annotation confidence Not enough data

Genome context

JH137990.1: 439579-439712 [+]

Mature stu-miR7993b-5p

• Accession: MIMAT0031187
• Description: Solanum tuberosum stu-miR7993b-5p mature miRNA
• Sequence: 1 - UUAAGUUAACCACAUAAAAUAUGU - 24
• Evidence: experimental ; Illumina [1]

Mature stu-miR7993b-3p

• Accession: MIMAT0030876
• Description: Solanum tuberosum stu-miR7993b-3p mature miRNA
• Sequence: 111 - AUAUUUUAUGUGGUUAACUUAACU - 134
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233