miRBase entry: stu-MIR7993c

Stem-loop stu-MIR7993c


Accession
MI0025786
Description
Solanum tuberosum stu-MIR7993c precursor miRNA
Gene family
MIPF0001663; MIR7993


Sequence

uuaaguuaaccauauaaaauauguucuccuuuaauuauaugcaucaaccucaaguugaaaauaucuuaaguuuuugcggcuuauuaaggugaaugcauagaauuaaaggagaugacauAUAUUUUAUGUGGUUAACUUAACU
((((((((((((((((((((((((((((((((((((.(((((((..((((.((((((((((..........)))).))))))....))))..))))))).))))))))))))....))))))))))))))))))))))))..

Structure
--                        ----            a       ca    ---c      -    uauc 
  uuaaguuaaccauauaaaauaugu    ucuccuuuaauu uaugcau  accu    aaguug aaaa    u
  ||||||||||||||||||||||||    |||||||||||| |||||||  ||||    |||||| ||||     
  AAUUCAAUUGGUGUAUUUUAUAua    agaggaaauuaa auacgua  ugga    uucggc uuuu    u
UC                        cagu            g       ag    auua      g    ugaa 


Annotation confidence Not enough data
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Genome context
JH138039.1: 449268-449409 [+]

Database links

Mature stu-miR7993c

Accession MIMAT0030877
Description Solanum tuberosum stu-miR7993c mature miRNA
Sequence 119 - AUAUUUUAUGUGGUUAACUUAACU - 142
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233