Stem-loop stu-MIR7997a

Accession

MI0025794

Description

Solanum tuberosum stu-MIR7997a precursor miRNA

Gene family

MIPF0001870; MIR7997

Sequence

AUGCUGCUCGGACUCUUCAAAaaugccguuggguucgugucggauccuccaaaaguaguggauuuuuggaugauccggcaagagugcgucagcauuauagagagugcgagcaacauac
(((.((((((.((((((....(((((.(.((.((((.(((((((((.(((((((((.....))))))))).))))))))).)))).)).).)))))...)))))).)))))).)))..

Structure

--   C      G      CAAA     c u  g    g         c         a 
  AUG UGCUCG ACUCUU    aaugc g ug guuc ugucggauc uccaaaagu g
  ||| |||||| ||||||    ||||| | || |||| ||||||||| ||||||||| u
  uac acgagc ugagag    uuacg c gc ugag acggccuag agguuuuua g
ca   a      g      -aua     a u  g    a         u         g 

Annotation confidence Not enough data

Genome context

JH137794.1: 1313823-1313940 [+]

Mature stu-miR7997a

• Accession: MIMAT0030885
• Description: Solanum tuberosum stu-miR7997a mature miRNA
• Sequence: 1 - AUGCUGCUCGGACUCUUCAAA - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233