miRBase entry: stu-MIR5303e

Stem-loop stu-MIR5303e


Accession
MI0025812
Description
Solanum tuberosum stu-MIR5303e precursor miRNA
Gene family
MIPF0001432; MIR5303

Literature search
3 open access papers mention stu-MIR5303e
(7 sentences)

Sequence

gagugugucggauucuccaacauuuguguaaUUUUGGAGAAUCUGACACGGGUGU
...(((((((((((((((((.(((.....))).))))))))))))))))).....

Structure
--gag                 c   u 
     ugugucggauucuccaa auu g
     ||||||||||||||||| ||| u
     GCACAGUCUAAGAGGUU Uaa g
UGUGG                 U   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH137948.1: 1126959-1127013 [-]

Database links

Mature stu-miR5303e

Accession MIMAT0030903
Description Solanum tuberosum stu-miR5303e mature miRNA
Sequence 32 - UUUUGGAGAAUCUGACACGGGUGU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233