miRBase entry: stu-MIR1886i

Stem-loop stu-MIR1886i


Accession
MI0025834
Description
Solanum tuberosum stu-MIR1886i precursor miRNA
Gene family
MIPF0001647; MIR1886

Literature search
1 open access papers mention stu-MIR1886i
(1 sentences)

Sequence

AUGAGAUGAAAUUAGCGUUUGGAUaugcgauUUUACGUUGAUUUCAUCUCAUGA
(((((((((((((((((((((......)))....))))))))))))))))))..

Structure
--                  ----   GA 
  AUGAGAUGAAAUUAGCGU    UUG  U
  ||||||||||||||||||    |||   
  UACUCUACUUUAGUUGCA    agc  a
AG                  UUUu   gu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH138128.1: 40008-40061 [-]

Database links

Mature stu-miR1886i-5p

Accession MIMAT0030925
Description Solanum tuberosum stu-miR1886i-5p mature miRNA
Sequence 1 - AUGAGAUGAAAUUAGCGUUUGGAU - 24
Evidence experimental
Illumina [1]

Mature stu-miR1886i-3p

Accession MIMAT0031202
Description Solanum tuberosum stu-miR1886i-3p mature miRNA
Sequence 32 - UUUACGUUGAUUUCAUCUCAUGA - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233