Stem-loop stu-MIR8025

Accession

MI0025835

Description

Solanum tuberosum stu-MIR8025 precursor miRNA

Sequence

ACAUACUCGACAUGCAAUUAAAUUauauaaaucaucacuauguuucucuuaauuaagcugaauuaauauaugauucaacuugcuuaagagaaaaauaauguauacuuauacuaaUUUAAUUGCAUGCCAAGUGUGUGG
(((((((.(.((((((((((((((((((((.....((.(((.((((((((((.((((.(((((((.....))))))).)))).)))))))))).))).)).....))))).))))))))))))))).).)))))))..

Structure

--       C A               -     aucau  c   g          u    c       a 
  ACAUACU G CAUGCAAUUAAAUUa uauaa     ca uau uuucucuuaa uaag ugaauua u
  ||||||| | ||||||||||||||| |||||     || ||| |||||||||| |||| ||||||| a
  UGUGUGA C GUACGUUAAUUUaau auauu     gu aua aaagagaauu guuc acuuagu u
GG       A C               c     cauau  a   a          c    a       a 

Annotation confidence Not enough data

Genome context

JH138169.1: 171074-171211 [+]

Mature stu-miR8025-5p

• Accession: MIMAT0030926
• Description: Solanum tuberosum stu-miR8025-5p mature miRNA
• Sequence: 1 - ACAUACUCGACAUGCAAUUAAAUU - 24
• Evidence: experimental ; Illumina [1]

Mature stu-miR8025-3p

• Accession: MIMAT0031203
• Description: Solanum tuberosum stu-miR8025-3p mature miRNA
• Sequence: 115 - UUUAAUUGCAUGCCAAGUGUGUGG - 138
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233