Stem-loop stu-MIR7984d

Accession

MI0025837

Description

Solanum tuberosum stu-MIR7984d precursor miRNA

Gene family

MIPF0001671; MIR7984

Literature search

1 open access papers mention stu-MIR7984d
(1 sentences)

Sequence

AUCCGAACUUUGACCGAAAUUGCUauaacaauaccgaacuuugaaaaggacauuuuaccccugcacuauuuaauaguguauuuuaaagguauauaaauaguaguguguccaugugggcacauauauaccuuuaaaauacacuauuaaauagugcagggguaaaauguccuuuucaaaguucgguauuguuauagCAAUUUCGGUCAAAGUUCGGAUAU
((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((((........((((((((....))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))..

Structure

--                                                                                              aaauagua        a 
  AUCCGAACUUUGACCGAAAUUGCUauaacaauaccgaacuuugaaaaggacauuuuaccccugcacuauuuaauaguguauuuuaaagguauau        gugugucc u
  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||  
  UAGGCUUGAAACUGGCUUUAACgauauuguuauggcuugaaacuuuuccuguaaaauggggacgugauaaauuaucacauaaaauuuccauaua        uacacggg g
UA                                                                                              --------        u 

Annotation confidence Not enough data

Genome context

JH138192.1: 420389-420606 [+]

Mature stu-miR7984d-5p

• Accession: MIMAT0030928
• Description: Solanum tuberosum stu-miR7984d-5p mature miRNA
• Sequence: 1 - AUCCGAACUUUGACCGAAAUUGCU - 24
• Evidence: experimental ; Illumina [1]

Mature stu-miR7984d-3p

• Accession: MIMAT0031204
• Description: Solanum tuberosum stu-miR7984d-3p mature miRNA
• Sequence: 195 - CAAUUUCGGUCAAAGUUCGGAUAU - 218
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233